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Merge branch 'revise_documentation' into 'master'

Revise and add documentations

See merge request !203
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......@@ -4,7 +4,7 @@ Welcome to the SOH Station Viewer documentation. Here you will find usage guides
On the left-hand side you will find a list of currently available help topics.
If the links of the Table of Contents are broken, click on Recreate Table of Content <img src='recreate_table_contents.png' height=30 style='margin: 3px 0px 0px 0px;'/> to rebuild it.
If the links of the Table of Contents are broken, click on Recreate Table of Content <img src='recreate_table_contents.png' height=30 /> to rebuild it.
The home button can be used to return to this page at any time.
......@@ -12,13 +12,11 @@ The home button can be used to return to this page at any time.
+ [Table of Contents](01%20_%20Table%20of%20Contents.help.md)
+ [Shortcuts](02%20_%20Shortcuts.help.md)
+ [How to Use Help](03%20_%20How%20to%20Use%20Help.help.md)
+ [Search List of Directories](04%20_%20Search%20List%20of%20Directories.help.md)
+ [Read from Data Card](05%20_%20Read%20from%20Data%20Card.help.md)
+ [Read Data](05%20_%20Read%20Data.help.md)
+ [Select SOH](06%20_%20Select%20SOH.help.md)
......@@ -28,13 +26,19 @@ The home button can be used to return to this page at any time.
+ [Gap Display](09%20_%20Gap%20Display.help.md)
+ [Change TPS Color Range](10%20_%20Change%20TPS%20Color%20Range.help.md)
+ [TPS Dialog](10%20_%20TPS%20Dialog.help.md)
+ [Display Data Point Info](12%20_%20Display%20Data%20Point%20Info.help.md)
+ [Ruler and Zooming](13%20_%20Ruler%20and%20Zooming.help.md)
+ [Save Plots](14%20_%20Save%20Plots.help.md)
+ [Save Plots](11%20_%20Save%20Plots.help.md)
+ [Plot Different Key](15%20_%20Plot%20Different%20Key.help.md)
+ [Search SOH n LOG](12%20_%20Search%20SOH%20n%20LOG.help.md)
+ [Search SOH n LOG](20%20_%20Search%20SOH%20n%20LOG.help.md)
+ [GPS Dialog](20%20_%20GPS%20Dialog.help.md)
+ [GPS Dialog](30%20_%20GPS%20Dialog.help.md)
+ [View-Edit Database Tables](21%20_%20View-Edit%20Database%20Tables.help.md)
+ [Firmware Notice](40%20_%20Firmware%20Notice.help.md)
......@@ -28,15 +28,20 @@ right of Search box.
### Toolbar
+ <img alt="Navigate to Table of Contents" src="images/help/table_contents.png" width="30" /> **Navigate to Table of Contents**: Go to 'Table of Contents' page.
+ <img alt="Navigate to Table of Contents" src="images/help/table_contents.png" width="30" /> **Navigate to Table of Contents**:
Go to 'Table of Contents' page.
+ <img alt="Recreate Table of Contents" src="images/help/recreate_table_contents.png" width="30" /> **Recreate Table of Contents**: If links in 'Table of Contents' are broken, the page can be recreated by clicking this button.
+ <img alt="Recreate Table of Contents" src="images/help/recreate_table_contents.png" width="30" /> **Recreate Table of Contents**:
If links in 'Table of Contents' are broken, the page can be recreated by clicking this button.
+ <img alt="Search Previous" src="images/help/search_previous.png" width="30" /> **Search Previous**: Highlight the previous found text and the view roll to its position.
+ <img alt="Search Previous" src="images/help/search_previous.png" width="30" /> **Search Previous**:
Highlight the previous found text and the view roll to its position.
+ <img alt="Search Next" src="images/help/search_next.png" width="30" /> **Search Next**: Highlight the next found text and the view roll to its position.
+ <img alt="Search Next" src="images/help/search_next.png" width="30" /> **Search Next**:
Highlight the next found text and the view roll to its position.
+ <img alt="Search Next" src="images/help/search_all_doc.png" width="30" /> **Navigate to Search Through All Documents**: Go to 'Search Through All Documents' result page.
+ <img alt="Search Next" src="images/help/search_results.png" width="30" /> **Navigate to Search Through All Documents**:
Go to 'Search Through All Documents' result page.
<br />
......@@ -69,14 +74,12 @@ text using **Search Previous** or **Search Next** button.
Type a searched text, click the button 'Search Through All Documents'.
A list of all documents that contain the searched text will be created in
document 'Search Through All Documents'.
a document called 'Search Results' which will be brought to Document View.
The document will be brought to Document View.
Click on the link of a document in 'Search Results' will bring it to
Document View.
Click on the link of a document in 'Search Through All Documents' will bring
its to Document View.
User can go back to 'Search Through All Documents' document any time by
clicking on the name on Document List.
User can go back to 'Search Results' document any time by clicking
on button <img alt="Search Next" src="images/help/search_results.png" width="30" /> on the toolbar.
<br />
# Select Main Data Directory
* To change Main Data Directory to where folders for different data set are nested,
click button 'Main Data Directory' (1). A file dialog will pop up to select the main
main directory.
* The path of the main directory will be displayed in (2) box.
* All folders under the main directory will be displayed in the directory list (3).
*
<br />
<img alt="From Memory Card checkbox" src="images/read_data/select_main_data_directory.png" height="250" />
<br />
<br />
# Read data from selected folders:
After selecting the option needed, users have two ways to read data from selected folders:
* Double-click on one folder in the directory list box, the reading will be started
* Select one by left-click on a folder in the directory list box
or select more than one folder by ctrl + left-click on different folders in
the list box, then click button 'Read Files' to start reading
*
<br />
<img alt="From Memory Card checkbox" src="images/read_data/read_files_button.png" height="200" />
<br />
<br />
# Read data from external memory card:
To read data from a memory card, navigate to the desired drive by clicking on
'Main Data Directory' button and check the checkbox "From Memory Card".
Directory List box will display "Memory Card". Click 'Read Files' to read data
from the memory card. *selecting 'Memory Card' in the directory list box isn't
necessary *
There are different kinds of memory cards that can be used in SOHViewer, eg. SD
card, CF card or flash drive.
<br />
<br />
<img alt="From Memory Card checkbox" src="images/read_data/from_memory_card_checkbox.png" height="50" />
<br />
## Baler data: data/ or sdata/
Baler data has data/ folder for main data and sdata/ folder for backup
data. When Baler data is selected, the radio buttons for data/ and sdata/
are enable for user to select one of the folder to read from.
<br />
<br />
<img alt="data/sdata radio buttons" src="images/read_data/data_sdata_radio_buttons.png" height="80" />
<br />
## RT130
When an RT130 folder is selected as the Main Data Directory, the serial numbers of the
RT130 DASs will be listed for user to select for reading.
<br />
<br />
<img alt="DAS in CF Card" src="images/read_data/das_in_cf_card.png" height="100" />
<br />
Note: DASs list will be displayed in the File List box no matter the From Data
Card checkbox is checked or not.
<br />
<br />
\ No newline at end of file
## To read data from data card:
Different kinds of data card: SD card, CF card or flash drive
To read data from data card, check the checkbox "From Data Card".
File List box will display "Data Card" and the data in the selected card can be
read without selecting "Data Card" in the box.
<br />
<br />
<img alt="From Data Card checkbox" src="images/data_card/from_data_card_checkbox.png" height="80" />
<br />
Note: This will work the same way as selecting the current folder nested in
the first level of a data set.
### Baler data
Baler data has data/ folder for main data and sdata/ folder for backup
data. When Baler data is selected, the radio buttons for data/ and sdata/
are enable for user to select one of the folder to read from.
<br />
<br />
<img alt="data/sdata radio buttons" src="images/data_card/data_sdata_radio_buttons.png" height="80" />
<br />
### CF card
When CF card is selected, the serial numbers of the DASs in the CF card will
be listed for user to select for reading.
<br />
<br />
<img alt="DAS in CF Card" src="images/data_card/das_in_cf_card.png" height="100" />
<br />
Note: DASs list will be displayed in the File List box no matter the From Data
Card checkbox is checked or not.
\ No newline at end of file
......@@ -11,8 +11,8 @@ To read all SOH channels in the selected data set, check the checkbox "All SOH"
<br />
<br />
NOTE: For better performance, this selection won't include channels with
sample rate greater than 1.
NOTE: For better performance, the reading for this selection won't include
channels with sample rate greater than 1.
<br />
<img alt="Select all SOH channels" src="images/select_soh/all_soh_checkbox.png" height="30" />
......@@ -27,6 +27,7 @@ when reading the data set.
## Get a preferred SOH channel list to read
Click button "Pref" to open "SOH Channel Preferences" to create/edit/select a
list of SOH channel to read.
<br />
<img alt="SOH Channel Preferences Dialog" src="images/select_soh/soh_channel_preferences.png" height="500" />
<br />
......@@ -44,7 +45,7 @@ represents an SOH list.
Check on the radio button (1) at the beginning of each row to select the list.
The radio button can also be checked automatically when user try to edit the row.
The radio button can also be checked automatically when user try to click on a widget in the row.
### Create a new list
......@@ -52,7 +53,7 @@ The radio button can also be checked automatically when user try to edit the row
+ Select a Data Type (3)
+ Add preferred channels to Preferred SOH List box (4). Channels are separated
by commas.
+ The Preferred SOH List can be edited directly in box 4, but user can also
+ The Preferred SOH List can be edited directly in box 4. User can also
click on button EDIT (5) to open a separated dialog for editing easier.
+ Button CLR (6) is for quickly empty the Preferred SOH List box.
......@@ -62,13 +63,13 @@ click on button EDIT (5) to open a separated dialog for editing easier.
<img alt="Buttons" src="images/select_soh/buttons.png" height="120" />
<br />
**Beside adding preferred channels manually, users have two other options to start the list:**
**Beside adding preferred channels manually, users have two other options to create the list:**
+ "Add DB channels": All SOH channels for the selected Data Type in the
database will be added to Preferred SOH List box.
+ "Scan Channel from MSeed Data": SOHView will scan for all available SOH
channels in the data set. At the bottom of the dialog there will be radio
channels in the selected MSeed data set. At the bottom of the dialog there will be radio
buttons representing data keys. Switching between data keys will display all info
related to the key like SOH channels with sample rate less than or equal to 1 in
related to the key which includes SOH channels with sample rate less than or equal to 1 in
preferred channels box (4); mass position channels, waveform channels, soh channels
with sample rate greater than 1 in tracking box; data time at the bottom of the dialog.
If the data is multiplexed, both start time and end time will be displayed. However,
......
# Selecting Mass Position
Users can either select mass position according to group of channels 1,2,3 or 4,5,6
or both by checking the checkboxes as displayed.
<br />
<br />
<img alt="Select Mass Position" src="images/select_masspos/select_masspos.png" height="30" />
<br />
......@@ -13,5 +13,6 @@ or both by checking the checkboxes as displayed.
If the selected mass position channel cannot be found, a warning will be
created in Processing Logs.
<br />
<br />
<img alt="Select Mass Position" src="images/select_masspos/warning_req_masspos_not_exist.png" height="60" />
<br />
\ No newline at end of file
......@@ -9,6 +9,7 @@
## Selecting all waveform channels
Check the checkbox "All Waveform Channels"
<br />
<br />
<img alt="Select all waveform channels" src="images/select_waveform/check_all_waveform_channels.png" height="40" />
<br />
......@@ -16,31 +17,30 @@ Check the checkbox "All Waveform Channels"
Unchecked the checkbox "All Waveform Channels", unchecked all "DSs"
checkboxes, clear textbox "MSeed Wildcards".
<br />
<br />
<img alt="Select no waveform channels" src="images/select_waveform/check_none_waveform_channels.png" width="250" />
<br />
## Selecting data streams for Reftek
Check some of "DSs" checkboxes with the index corresponding to the data
streams you want to select.
<br />
<br />
<img alt="Select data streams" src="images/select_waveform/select_data_stream.png" width="250" />
<br />
If some "DSs" are checked, but data type isn't Reftek and either TPS or RAW
are checked, a warning will be created, "Checked data streams will be ignored
for none-RT130 data type."
If some "DSs" are checked, but data type isn't Reftek, a warning will be created,
"Checked data streams will be ignored for none-RT130 data type."
## Selecting mseed's waveform
User can add different wildcards separated with commas to MSeed Wildcard
textbox. For example: \*, LH*, L*1.
<br />
<img alt="Select data streams" src="images/select_waveform/mseed_wildcards.png" width="250" />
<img alt="Select MSeed wildcards" src="images/select_waveform/mseed_wildcards.png" width="250" />
<br />
If some wildcard are added, but data type is Reftek and either TPS or RAW are
checked, a warning will be created, "Checked data streams will be ignored
If some wildcard are added, but data type is Reftek, a warning will be created, "Checked data streams will be ignored
for RT130 data type."
## Displaying waveform channels
......
......@@ -2,6 +2,7 @@
To display gaps, add minimum length of gaps in Minimum Gap Length box. If no
length set, gap bar will not show up.
<br />
<br />
<img alt="Select Mass Position" src="images/gaps/gap_length_box.png" height="30" />
<br />
......@@ -11,10 +12,12 @@ length set, gap bar will not show up.
## Color
Gap will be displayed in red color.
<br />
<br />
<img alt="Gap Color" src="images/gaps/gap.png" height="60" />
<br />
Overlap will be displayed in orange color.
<br />
<br />
<img alt="Overlap" src="images/gaps/overlap.png" height="60" />
<br />
\ No newline at end of file
# Change TPS Color Range
# Plotting TPS
Each block of TPS shows the square root of the average of the squares of
each 5 minute of data. Each TPS bar consists of 288 blocks bar representing a
UT day. One TPS channel channel consists of multi TPS bars depends on the time
range the channel cover.
Each 5-minute block is color-coded according to the average amplitude
during the period following the Color range code at the end of this document.
<br />
---------------------------
---------------------------
# TPS Dialog
<br />
<img alt="Change TPS Color Range" src="images/tps/tps_color_range.png" height="100" />
<br />
<img alt="TPS Dialog" src="images/tps/tps_dialog.png" width="700" />
<br />
TPS are plotted in tab(s).
* If total days <= 180: all channels are plotted in one tab.
* If total days > 180: each channel will be plotted in a separate tab.
<br />
---------------------------
---------------------------
# TPS Color Range
## TPS plot
The TPS plot shows the square root of the average of the sum of the squares of
the data amplitudes over each 5-minute period of each day covering the time
range of the data on the main display. Each horizontal line is one UT day.
Each 5-minute block is color-coded according to the average amplitude
during the period.
<br />
<br />
<img alt="Change TPS Color Range" src="images/tps/tps_color_range.png" height="100" />
<br />
## Selecting Color Range
Select the desired color range from the dropdown list. There are 4 different
color ranges in the list: Antarctica, Low, Medium and High
User can select the desired color range from the dropdown list in the above picture. There are 4 different
color ranges in the list: Antarctica, Low, Medium and High
<br />
## Applying the selected Color Range
* Click button "RePlot Current Tab" to apply new selected color range to TPS plots in the current tab.
* Click button "RePlot All Tabs" to apply new selected color range to TPS plots in all tabs.
<br />
## Color range code
**Antarctica**
* Dark Grey/Black: there was no data for that period or the average really
was 0.0 (not likely)
......@@ -72,7 +90,4 @@ was 0.0 (not likely)
<br />
## Applying the selected Color Range
Click button "RePlot" to re-plot TPS with new selected color range.
<br />
# Display info
Click on any data point to display the info of the data point in the info box
at the bottom of each plotting dialog
<br />
<br />
## Mseed SOH data
<br />
<br />
<img alt="MSeed SOH data info" src="images/display_data_point_info/mseed_soh_data.png" width="600" />
<br />
<br />
## Waveform data
<br />
<br />
<img alt="Waveform data info" src="images/display_data_point_info/waveform_data.png" width="600" />
<br />
<br />
## TPS data
Click on one tps channel will display info at the same position for all tps channels no matter
the tps channels are in the same tab or in different tabs.
<br />
<br />
<img alt="Waveform data info" src="images/display_data_point_info/tps_data.png" width="600" />
<br />
<br />
## RT130 SOH data
Click on one SOH data point will highlight the SOH message corresponding to that line.
<br />
<br />
<img alt="MSeed SOH data info" src="images/display_data_point_info/rt130_soh_data.png" width="600" />
<br />
<br />
# Ruler
Ctrl/Cmd + Click on a point in a plotting, a yellow ruler will show up with time on top.
Rulers will also show up on other plotting dialog at the corresponding position
On TPS plotting a yellow square box will show up to mark the corresponding data points on
all the TPS channels. Ctr/cmd + Click on TPS plot will work the same.
<br />
<br />
<img alt="Ruler" src="images/ruler_and_zooming/ruler.png" width="600" />
<br />
<br />
---------------------------
---------------------------
# Zooming
Shift + Click to mark the first zooming point, then Shift + click again to mark
the second zooming point to zoom the area between two zooming points.
The zooming task will be performed in the area corresponding to zooming triggering
dialog.
For TPS, zooming won't be performed but mark with 2 orange bars. Zooming can't
be triggered from TPS dialog.
<br />
<br />
<img alt="Ruler" src="images/ruler_and_zooming/tps_zooming.png" width="600" />
<br />
<br />
<br />
......@@ -3,10 +3,8 @@
---------------------------
---------------------------
## Step 1: click 'Save Plot'
In Main Window, Raw Data Plot and TPS Plot there are buttons labeled 'Save Plot'.
User need to click those button to save plots in each window.
## Step 1: click 'Save Plot'
To save the plot currently displayed a plotting window, click 'Save Plot'.
* Saving State-of-Health plots
<br />
......@@ -16,14 +14,15 @@ User need to click those button to save plots in each window.
<br />
<img alt="Save Waveform" src="images/save_plots/save_button_wf.png" height="60" />
<br />
* Saving Time-power-square plots
* Saving Time-power-square plots:
To save the plot currently displayed on the current tab of tps dialog, click "Save Current Tab".
<br />
<img alt="Save TPS" src="images/save_plots/save_button_tps.png" height="80" />
<br />
<br />
<br />
If the current color mode is black, user will be asked to continue or cancel
If the current color mode is black, user will be asked to continue or cancel
to change mode before saving the image.
<br />
......@@ -31,15 +30,15 @@ to change mode before saving the image.
<img alt="Want to change color mode?" src="images/save_plots/question_on_changing_black_mode.png" height="150" />
<br />
* If user click 'Cancel'. The process of saving plots will be canceled for user
* If user click 'Cancel'. The process of saving plots will be canceled for user
to change mode before restarting saving plots again.
* If user click 'Continue'. The process of saving plots will be continue and the
* If user click 'Continue'. The process of saving plots will be continue and the
image will be saved in black mode.
<br />
---------------------------
## Step 2: Edit file path and select image's format
Once clicking on 'Save Plot' button, the 'Save Plot' dialog will pop up.
## Step 2: Edit file path and select image's format
Step 1 will bring the 'Save Plot' dialog up.
<br />
<br />
......@@ -47,11 +46,11 @@ Once clicking on 'Save Plot' button, the 'Save Plot' dialog will pop up.
<br />
+ The default path to save the image file is preset in (1) text box. If user
wants to change the path, click on 'Save Directory button' to open file dialog
wants to change the path, click on 'Save Directory' button to open file dialog
for changing path.
+ The default filename to save the image is preset in (2) text box. User can
change the name in this box.
+ In side oval (3) are the radio buttons to select image format to save
change the filename in this box.
+ Inside red oval (3) are the radio buttons to select image format to save
file.
+ For 'PNG' format, user can change DPI which is the resolution of the
image. Other formats are vector formats which don't require resolution.
......
## Plotting different key
There is a chance that the selected data set has more than one key defined by
station id in MSeed data or (network code, serial number) in Reftek.
station id in MSeed data or (serial number, network code) in Reftek.
<br />
......@@ -8,27 +8,34 @@ Button "Plot Different Key" has been implemented to allow user select a
different key after data from selected files are plotted.
<br />
<br />
This button is disabled by default.
<br />
<br />
<img alt="Plot Different Key button disabled" src="images/plot_different_key/plot_different_key_button_disabled.png" height="60" />
<br />
<br />
After data are loaded, if the data set has more than one keys, user will be
asked to select one key to plot. User will click on one of the key buttons or
click Abort which will trigger plotting the first key by default.
After data are loaded, if the data set has more than one key, user will be
asked to select one key to plot. User will click on one of the key buttons to plot a data set.
<br />
<br />
<img alt="Select One Key to Display dialog" src="images/plot_different_key/select_one_key_to_display_dlg.png" height="120" />
<br />
<br />
The button "Plot Different Key" will be enabled.
<br />
<br />
<img alt="Plot Different Key button enabled" src="images/plot_different_key/plot_different_key_button_enabled.png" height="60" />
<br />
<br />
Now user can click on the button to access a dialog that allows user to select
another key for plotting. User can click on one of the key buttons to plot that
key's data set or click Abort to cancel.
<br />
<br />
<img alt="Select a Different Key to Replot" src="images/plot_different_key/select_a_different_key_to_replot_dlg.png" height="110" />
<br />
<br />
\ No newline at end of file
# Search Messages
<br />
<br />
<img alt="Search Dialog" src="images/search_messages/search_dialog.png" width="600" />
<br />
<br />
---------------------------
---------------------------
## How to open
# How to open
Search Messages dialog will open by itself after a data set are done with reading and plotting.
If it is closed by any reason, user can open it by go to Menu - Forms, and click on "Search Messages"
If it is closed by any reason, user can open it by go to Menu - Forms and click on "Search Messages"
<br />
---------------------------
## User interface
# User interface
<br />
### Search box
## Search box
The box to enter search text is placed at the top of the dialog.
<br />
### Toolbar
## Toolbar
+ <img alt="To Selected" src="images/search_messages/to_selected.png" width="30" /> **To Selected**: The current table rolls back to the current selected line.
......@@ -32,27 +36,51 @@ The box to enter search text is placed at the top of the dialog.
<br />
### Tabs
## Tabs
+ **Search SOH Lines** tab: to list all lines that includes searched text with
its channel
+ **Processing Logs** tab: to list all processing logs with its log type and
color of each line depends on its log type.
+ Each of the following tab is for one of SOH LOG channels
<br />
<br />
<img alt="Search SOH Lines" src="images/search_messages/search_soh_lines.png" width="600" />
<br />
<br />
+ **Processing Logs** tab: to list all logs of data and plotting processing
with its log type and color of each line depends on its log type.
<br />
<br />
<img alt="Processing Log" src="images/search_messages/processing_log.png" width="600" />
<br />
<br />
+ Each of the following tab is for an SOH log channels
<br />
<br />
<img alt="An SOH Log Channel" src="images/search_messages/soh_log_channel.png" width="600" />
<br />
<br />
**MSeed**: For a channel that are wrapped in MSeed format, the log messages of the channel will be
nested in tab of the channel name. For a text log file under the folder of a station name, the log will only
be displayed when the station is selected and the tab name will be 'TXT'. For a text log file that isn't
under any station name folder, the log will be display for any selected station and the tab name will be 'TEXT'.
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;**RT130**: All the SOH messages
of the selected set will be displayed under tab 'SOH'.
<br />
### Info box
Is the box to display the info of the selected line.
## Info box
The box at the bottom to display the info of the selected line.
<br />
---------------------------
## How to search
# How to search
<br />
### Search for a text
## Search for a text
Type a searched text, the searched text will be highlighted through the table
and the current table scrolls to the first line that contains the searched text.
......@@ -61,15 +89,16 @@ search text using **Search Previous** or **Search Next** button.
<br />
### Filter all lines with searched text
## Filter all lines with searched text
The first tab **Search SOH Lines** is for filtering all lines that contains
the searched text.
<br />
### Interaction with RT130 SOH channel's data point
## Interaction with RT130 SOH channel's data point
When user click on a clickable data point on a SOH channel of RT130, SOH tab
will be focused and the line corresponding to the data point will be brought
up to view.
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......@@ -2,4 +2,4 @@ Pegasus firmware was updated to record VEI in millivolts.
Previous versions of the firmware recorded VEI in microvolts.
We decided to apply VEI's conversion factor in newer version of Pegasus.
If user may see higher than expected values in the older version of Pegasus.
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If user observe values higher than expected values for Pegasus, the data is of the older version.
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documentation/images/display_data_point_info/mseed_soh_data.png

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documentation/images/display_data_point_info/rt130_soh_data.png

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